Difference between revisions of "Data"
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| + | =Open Source Cognitive Electrophysiology Data= | ||
| − | Separate requests must be made for each dataset. For more information on requesting and downloading data, [[Requesting | + | The lab is migrating our data sharing to OpenNeuro, an open-source platform where we are uploading our datasets once we have converted them to BIDS standards. |
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| + | Here is some of our intracranial data: [https://openneuro.org/datasets/ds004789 FR1], [https://openneuro.org/datasets/ds004809 catFR1], [https://openneuro.org/datasets/ds005059 PAL1], [https://openneuro.org/datasets/ds004865 pyFR] | ||
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| + | As well as some of our scalp EEG: [https://openneuro.org/datasets/ds004395 PEERS], [https://openneuro.org/datasets/ds004706 NICLS] | ||
| + | |||
| + | Please contact sas-kahana-sysadmin@sas.upenn.edu for any questions about the data, and keep an eye out on OpenNeuro as we update these releases and share new datasets. Also, let us know about the research you do with the data — all we ask is that you cite where you got it from using the "How to Cite" panel on OpenNeuro! | ||
| + | |||
| + | =Cognitive Electrophysiology Data Portal= | ||
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| + | The below publications have available electrophysiological data. They generally fall into two categories: scalp EEG from the [[Penn_Electrophysiology_of_Encoding_and_Retrieval_Study | Penn Electrophysiology of Encoding and Retrieval Study (PEERS)]] and intracranial EEG from epilepsy patients collected mostly during the [[RAM | Restoring Active Memory (RAM)]] project. | ||
| + | |||
| + | The Computational Memory Lab stores our data using Box. To request access to the data folder for a specific publication, click the "Ephys Data" link for the desired publication. | ||
| + | |||
| + | '''Papers based on the ECoG/iEEG dataset collected as part of the RAM project may not be listed. To access to this data, please instead submit a request [http://memory.psych.upenn.edu/Request_RAM_Public_Data_access here] and indicate that you are intending to use the RAM dataset.''' | ||
| + | |||
| + | <!-- Separate requests must be made for each dataset.-->For more information on requesting and downloading data, [[Requesting Electrophysiological Data|please click here]]. | ||
Please also find our collection of [[Data Archive|behavioral testing data here]]. | Please also find our collection of [[Data Archive|behavioral testing data here]]. | ||
Latest revision as of 16:09, 6 May 2024
Open Source Cognitive Electrophysiology Data
The lab is migrating our data sharing to OpenNeuro, an open-source platform where we are uploading our datasets once we have converted them to BIDS standards.
Here is some of our intracranial data: FR1, catFR1, PAL1, pyFR
As well as some of our scalp EEG: PEERS, NICLS
Please contact sas-kahana-sysadmin@sas.upenn.edu for any questions about the data, and keep an eye out on OpenNeuro as we update these releases and share new datasets. Also, let us know about the research you do with the data — all we ask is that you cite where you got it from using the "How to Cite" panel on OpenNeuro!
Cognitive Electrophysiology Data Portal
The below publications have available electrophysiological data. They generally fall into two categories: scalp EEG from the Penn Electrophysiology of Encoding and Retrieval Study (PEERS) and intracranial EEG from epilepsy patients collected mostly during the Restoring Active Memory (RAM) project.
The Computational Memory Lab stores our data using Box. To request access to the data folder for a specific publication, click the "Ephys Data" link for the desired publication.
Papers based on the ECoG/iEEG dataset collected as part of the RAM project may not be listed. To access to this data, please instead submit a request here and indicate that you are intending to use the RAM dataset.
For more information on requesting and downloading data, please click here.
Please also find our collection of behavioral testing data here.
2024
Schonhaut, D. R., Rao, A. M., Ramayya, A. G., Solomon, E. A., Herweg, N. A., Fried, I., et al. (2024). MTL neurons phase-lock to human hippocampal theta. eLife, 13, e85753.
(pdf, code, Ephys data)
2022
Sakon, J. J. and Kahana, M. J. (2022). Hippocampal ripples signal contextually mediated episodic recall. Proceedings of the National Academy of Sciences, 119(40), e2201657119.
(pdf, code, Ephys data)
2021
Adamovich-Zeitlin, R., Wanda, P. A., Solomon, E., Phan, T., Lega, B., Jobst, B. C., et al. (2021). Biomarkers of memory variability in traumatic brain injury. Brain Communications, 3(1).
(pdf, code, Ephys data)Kragel, J. E., Ezzyat, Y., Worrell, G. A., Sperling, M. R., Gross, R. E., Lega, B. C., et al. (2021). Distinct cortical systems reinstate content and context information during memory search. Nature Communications, 12.
(pdf, supplemental, code, Ephys data)Weidemann, C. T. and Kahana, M. J. (2021). Neural measures of subsequent memory reflect endogenous variability in cognitive function. Journal of Experimental Psychology: Learning, Memory, and Cognition, 47(4), 641–651.
(pdf, code, Ephys data)
2020
Herweg, N. A., Sharan, A. D., Sperling, M. R., Brandt, A., Schulze-Bonhage, A., and Kahana, M. J. (2020). Reactivated spatial context guides episodic recall. The Journal of Neuroscience, 40(10), 2119–2128.
(pdf, poster, code, Ephys data)
2019
Meisler, S. L., Kahana, M. J., and Ezzyat, Y. (2019). Does data cleaning improve brain state classification? Journal of Neuroscience Methods, 328.
(pdf, code, Ephys data)Solomon, E. A., Lega, B. C., Sperling, M. R., and Kahana, M. J. (2019). Hippocampal theta codes for distances in semantic and temporal spaces. Proceedings of the National Academy of Sciences, 116(48), 24343-24352.
(pdf, code, Ephys data)Weidemann, C. T. and Kahana, M. J. (2019). Dynamics of brain activity reveal a unitary recognition signal. Journal of Experimental Psychology: Learning, Memory, and Cognition, 45(3), 440–451.
(pdf, code, Ephys data)
2017
Ezzyat, Y., Kragel, J. E., Burke, J. F., Levy, D. F., Lyalenko, A., Wanda, P. A., et al. (2017). Direct brain stimulation modulates encoding states and memory performance in humans. Current Biology, 27(9), 1251–1258.
(pdf, code, Ephys data)
2016
Weidemann, C. T. and Kahana, M. J. (2016). Assessing recognition memory using confidence ratings and response times. Royal Society Open Science, 3, 150670.
(pdf, code, Ephys data)
2015
Long, N. M. and Kahana, M. J. (2015). Successful memory formation is driven by contextual encoding in the core memory network. NeuroImage, 119, 332-337.
(pdf, code, Ephys data)Merkow, M. B., Burke, J. F., and Kahana, M. J. (2015). The human hippocampus contributes to both the recollection and familiarity components of recognition memory. Proceedings of the National Academy of Sciences, 112(46), 14378–14383.
(pdf, Ephys data)Ramayya, A. G., Pedisich, I., and Kahana, M. J. (2015). Expectation modulates neural representations of valence throughout the human brain. NeuroImage, 115, 214-223.
(pdf, code, Ephys data)
2014
Geller, A. S., Burke, J. F., Sperling, M. R., Sharan, A. D., Litt, B., Baltuch, G. H., et al. (2014). Eye closure causes widespread low-frequency power increase and focal gamma attenuation in the human electrocorticogram. Clinical Neurophysiology, 125(9), 1764-73.
(pdf, Ephys data)Long, N. M., Burke, J. F., and Kahana, M. J. (2014). Subsequent memory effect in intracranial and scalp EEG. NeuroImage, 84, 488–494.
(pdf, Ephys data)Ramayya, A. G., Misra, A., Baltuch, G. H., and Kahana, M. J. (2014). Microstimulation of the human substantia nigra following feedback alters reinforcement learning. Journal of Neuroscience, 34(20), 6887–6895.
(pdf, Ephys data)
2013
Miller, J. F., Neufang, M., Solway, A., Brandt, A., Trippel, M., Mader, I., et al. (2013). Neural activity in human hippocampal formation reveals the spatial context of retrieved memories. Science, 342(6162), 1111-1114.
(pdf, supplemental, Ephys data)Morton, N. W., Kahana, M. J., Rosenberg, E. A., Sperling, M. R., Sharan, A. D., and Polyn, S. M. (2013). Category-specific neural oscillations predict recall organization during memory search. Cerebral Cortex, 23(10), 2407–2402.
(pdf, Ephys data)van Vugt, M. K., Sekuler, R., Wilson, H. R., and Kahana, M. J. (2013). An electrophysiological signature of summed similarity in visual working memory. Journal of Experimental Psychology: General, 142(2), 412–425.
(pdf, Ephys data)
2012
van der Meij, R., Kahana, M. J., and Maris, E. (2012). Phase-amplitude coupling in human ECoG is spatially distributed and phase diverse. Journal of Neuroscience, 32(1), 111-123.
(pdf, Ephys data)
2011
Maris, E., van Vugt, M. K., and Kahana, M. J. (2011). Spatially distributed patterns of oscillatory coupling between high-frequency amplitudes and low-frequency phases in human ieeg. NeuroImage, 54(2), 836-850.
(pdf, Ephys data)
2010
van Vugt, M. K., Schulze-Bonhage, A., Litt, B., Brandt, A., and Kahana, M. J. (2010). Hippocampal gamma oscillations increase with working memory load. Journal of Neuroscience, 30(7), 2694–2699.
(pdf, Ephys data)
2009
Jacobs, J. and Kahana, M. J. (2009). Neural representations of individual stimuli in humans revealed by gamma-band electrocorticographic activity. Journal of Neuroscience, 29(33), 10203–10214.
(pdf, Ephys data)van Vugt, M. K., Schulze-Bonhage, A., Sekuler, R., Litt, B., Brandt, A., Baltuch, G., et al. (2009). Intracranial electroencephalography reveals two distinct similarity effects during item recognition. Brain Research, 1299, 33–44.
(pdf, Ephys data)Weidemann, C. T., Mollison, M. V., and Kahana, M. J. (2009). Electrophysiological correlates of high-level perception during spatial navigation. Psychonomic Bulletin & Review, 16(2), 313–319.
(pdf, Ephys data)
2007 and Earlier
Jacobs, J., Hwang, G., Curran, T., and Kahana, M. J. (2006). EEG oscillations and recognition memory: Theta correlates of memory retrieval and decision making. NeuroImage, 15(2), 978–87.
(pdf, Ephys data)Rizzuto, D., Madsen, J. R., Bromfield, E. B., Schulze-Bonhage, A., and Kahana, M. J. (2006). Human neocortical oscillations exhibit theta phase differences between encoding and retrieval. NeuroImage, 31(3), 1352–1358.
(pdf, Ephys data)Ekstrom, A. D., Caplan, J., Ho, E., Shattuck, K., Fried, I., and Kahana, M. (2005). Human hippocampal theta activity during virtual navigation. Hippocampus, 15, 881–889.
(pdf, Ephys data)Howard, M. W., Rizzuto, D. S., Caplan, J. C., Madsen, J. R., Lisman, J., Aschenbrenner-Scheibe, R., et al. (2003). Gamma oscillations correlate with working memory load in humans. Cerebral Cortex, 13, 1369–1374.
(pdf, Ephys data)Rizzuto, D., Madsen, J. R., Bromfield, E. B., Schulze-Bonhage, A., Seelig, D., Aschenbrenner-Scheibe, R., et al. (2003). Reset of human neocortical oscillations during a working memory task. Proceedings of the National Academy of Sciences, USA, 100(13), 7931–7936.
(pdf, Ephys data)Sederberg, P. B., Kahana, M. J., Howard, M. W., Donner, E. J., and Madsen, J. R. (2003). Theta and gamma oscillations during encoding predict subsequent recall. Journal of Neuroscience, 23(34), 10809–10814.
(pdf, Ephys data)Raghavachari, S., Kahana, M. J., Rizzuto, D. S., Caplan, J. B., Kirschen, M. P., Bourgeois, B., et al. (2001). Gating of human theta oscillations by a working memory task. Journal of Neuroscience, 21(9), 3175-3183.
(pdf, Ephys data)
